ISSN0373-580 X Bol. Soc. Argent. Bot. 38 (3-4): 311
-
317.2003ELECTROPHORETIC
ANALYSIS
OFSEED
PROTEINS
INARGENTINEAN
SPECIES
OFPHASEOLINAE (FABACEAE)
SHIRLEY MARY ESPERT1andALICIA DIANA BURGHARDT1
Summary: Therelationships among Argentinean speciesof four generaofthe subtribe Phaseolinae
(Phaseoleae,Fabaceae): Phaseolus, Vigna, DolichopsisandMacroptilium, hadnever beenanalyzed
together using molecular markers. Inthis paper, twentyspecies of these generawerestudied bymeans of electrophoresis of seedstorage proteinson aSDS-PAGEsystem. Seedproteinelectrophoretic banding patterns allowed the recognition of a genetic basis of the generic divisions,whichwere
proposed using morphologicalandpalinologicaldata.Polypeptidic profiles provided interestingdatafor the analysis the subgeneric divisions.Moreover,the presence of marker bandsallowstheunequivocal characterization of mostoftheArgentineanspecieshere studied.
KeyWords: Systematics, Phaseolinae, Fabaceae, seedprotein electrophoresis
Resumen:Análisis electroforéticode lasespecies argentinasdePhaseolinae(Fabaceae).Lasrelaciones
entrelas especies argentinasde cuatro génerosde la subtribuPhaseolinae(Phaseoleae,Fabaceae):
Phaseolus, Vigna,Dolichopsisy Macroptilium,fueronanalizadas por primeravez enconjuntousando
marcadoresmoleculares. Seestudiaronveinte especiesde estos géneros utilizandoelectroforeslsdé
proteínasseminales,en unsistemaSDS-PAGE. Los patronesdebandas proteicas evidenciaronla
existenciadeuna basegenética paralasdivisiones genéricas, quéfueronpropuestasmedianteeluso
dedatosmorfológicosypalinológicos.Losperfiles polipeptídicosproveeninformacióninteresantepara
analizarlas divisiones subgenéricas. Además,lapresencia de bandas marcadorespermite la
caracterización inequívocade lamayoría de las especies argentinas aquí estudiadas.
Palabrasclave:Sistemática, Phaseolinae, Fabaceae,electroforesisde proteínasseminales.
taxonomicsystemacceptedatpresent,including delimita¬ tions of thegeneraand theirsubdivisions in subtribe Phaseolinae. Thisclassificationisbasedonmorphological
andpalinological data. These authorsemphasizedthe fact that therearestilltoomanyproblemstobesolved dueto thegreatamountoftaxainvolved.
All of the Phaseolinaespeciesgrowing in Argen¬ tinahadneverbeen analyzed together.
Phaseolus L. has three sections:sect.Phaseolus,
the only section with species in Argentina, Alepidocalyx (Piper) Marèchalelal. andMinkelersia (MartetGall.)Marèchaletal. The “commonbean”P. vulgaris is very important in the economy of Northwestern Argentina region. The study of the naturalpopulations of P. vulgarisvar.aborigineus, the wild relativeofthecommonbean, is crucial for cropbreeding (Palacios & Hoc, 2001).
Manyspecies of Vignaareusedasfoodand for¬ age(Smartt, 1990),sotheknowledge of thegroupis important for their biotechnological improvement. Resultsreportedby Delgado Salinasetal. (1993)are consistent with the hypothesis ofapolyphyletic
ori-INTRODUCTION
TheSubtribe Phaseolinae Benth. (Phaseoleae, Fabaceae)has23 genera, four of them growing in Argentina: Phaseolus L. emendVerde., Vigna Savi, Macroptilium (Benth.) Urb., and Dolichopsis Hassl. Thereareseveral morphological(Verdcourt,1970; Marèchaletal. 1978; Drewes, 1995; Palacios & Hoc, 2001),biochemical (Zallocchi,1992)and molecular studies (Becerra Velasquez & Gepts, 1994; Fofana, 1999;Ruffini Castiglione etal.1998; Goel etal. 2002), which have attemptedtosolve taxonomic problems in thisgroup.However, only partial analyses have beenmade andmostofthestudies have exclusively involved wild species of Mesoamerican origin (Maquetetal. 1999).
Marèchaletal. {op. cit.)developed the morphological
'Lab.Plantas Vasculares,Depto.BiodiversidadyBiología Experimental,Facultad de CienciasExactasyNaturales,Uni¬ versidad de Buenos Aires. Cantilo y Costanera Norte, 4o piso,
Pabellón 2, CiudadUniversitaria(C1428EHA), BuenosAi¬
Seedprotein analysis. Storageproteinswere ex¬ tractedbygrindingoneor morematureseeds,and mixing 100mgofthepowderwith0.4mlof0.5MNaCl. Thesuspensionwas rest atroom temperaturefortwo hours and centrifugedat10000 rpm for 10min.The supernatantwasmixedwithanequalvolumeofcrack¬
ingbuffer (0.125M Tris-HCl pH 6.8; 4% w/v SDS;
20%. w/vGlycerol; 10% w/v 2-mercaptoethanol;
0.001%w/vbromophenolblue)andboiled for 2min. One-dimensionalsodium dodecyl sulfatepolyacryla¬
mide gelelectrophoresis (SDS-PAGE)
wás
carriedout ac-cordingtoLaemmli(1970).Therunninggelcontained15% ofpolyacrylamidein1.5MTris-HClpH8.8buffer,with10% w/v SDS, 0.05% w/v ammoniumpersulfate and 0.0005% TEMED.Thestackinggelhad4.5%ofpolyacrylamideina 0.5MTris-HClpH6.8buffer,with10%w/vSDS,0.005%w/ vammoniumpersulfate and 0.0001% TEMED. The elec¬ trode buffer had 0.025MTris,0.192M GlycineatpH 8.3, and0.1%w/vSDS.The runningwasconducted
for
3-5hoursat40 mAand 120 V inaBioRadProteanIIapparatus.The gelwasstained with 0.05% w/v Coomasie Blue and 12% w/v trichloroacetic acid, overnight,and thenwashedwith 7%v/Vacetic acid solution.
Numerical analysis. Basic data matrixwasmade consideringproteinbandsintheelectrophoreticrun¬ ningsasabsence/presence characters.UPGMA,Mini¬ mumSpanning Tree andPrincipalCoordinates Analy¬ sis methods were applied.The analysis wasper¬ formedusingtheNTSYS-pc 1.7
(Numerical
Taxonomy andMultivariate Analysis System)computerprogram designedby F. James Rohlf(1988)ginofthe genus Vigna. They divided this genusin
twosubclades:oneincluding the Old Worldsubgen¬ eraand the American subgenusLasiospron, and the other subcladestrictlyofthe New World. Here, spe¬
cies of the subgeneraSigmoidotropis, Lasiospron and Vignagrowing inArgentina have beenanalyzed.
Only V.hookeri and V.caracalla havenotbeenin¬
cludedinthe analysis. The latter becausewecouldn’t collectmaturelegumes, and V. hookeri because it is believed that isextinct,for the lastcollectionwasin the1950's(TroncosodeBurkart&Bacigalupo, 1987). The third genus here studiedisMacroptilium,
with ninespecies in Argentina,all of them included in the analysis. Cladistic analysis using morphologi¬ cal characterssuggeststhe monophyly of bothsec¬ tions of the genera: Macroptilium andMicrocochle
(Drewes, 1995).Studiesusingmoleculartechniques
hadneverbeencarriedoutinthis group.
Dolichopsis
isamonotypic genus.The onlyspe¬ cies D. paraguariensis Hassler is endemictoPara¬ guay andArgentina (Palacios & Hoc, 2001).In thepresentwork,speciesofPhaseolus,Vigna,
MacroptiliumandDolichopsishave been studied bymeansofelectrophoresisofseedstorageproteins.
This techniquehasprovedtobe usefulinlegume systematics (Burghardt &Palacios,1997;Burghardt, 2000aandb;Fotsoetal. 1994;Przybylska, 1995;
Przybylska & Zimniak-Przybylska, 1997; Maquetet al. 1999)Ithasbeenusedtoclarifyspecies delimitations,
andtoperformmanysupra-and intraspecificsystematic
studies(DeBustosetal. 1999;Sammour, 1994).
The main objective of this work istofinduseful
molecular markers of theArgentineanspecies of the genera Vigna, Phaseolus, Dolichopsis and
Macroptilium,whichwillallow the identification of each species, andto analyze thepossible genetic variabilitybetween and within them. Many of the species of these generaareeconomically important, so a greaterknowledge of theirvariabilityand rela¬
tionshipsiscrucial inordertoestablishstrategiesfor plantbreedingandgermplasmmanagement.
RESULTS
A hundreadantthirty fiveproteinbandsarefound inthe 20taxaanalyzed. Figure 1showssomeofthe proteinpatternsobtained inthisstudy.Within each species, all seeds had thesame’proteinpattern.The
onlyexceptionisPhaseolusvulgaris:P.vulgarisvar. vulgarisandP.vulgaris
var.
aborigineushaveincom¬ mon16oftheir 17 bands.Threemarkerbands(i.e.,exclusiveandconstantbands) arefoundinMacroptiliumand fiveinPhaseolus,whileno marker bandsaredetectedinVignaas awhole.Speciesof the fourgenerashareonebandat66kDa. Species of Phaseolus, Vignaand Macroptilium share two bandsat 116and21kDa.AllthespeciesofMacroptiliumand Vigna sharethreebands,twoofthemaround200 andonearound 18kDa(Fig.l).
MATERIALS
ANDMETHODS
Plant Material. Sixty-one accessions oftwenty Argentinean
species
of Phaseolus, Vigna,DolichopsisandMacroptiliumwerestudied."Collec¬
tion data of the material examined in this studyare indicated in Table 1. Theyarealldeposited in the
Herbarium oftheFacultadde CienciasExactasyNatu¬
rales(University ofBuenos Aires),BAFC(abbrevia¬ tionaccordingtoHolmgrenetal. 1981).
S.M.Espert& A.Burghardt, Electrophoretic Analysisof Seed Proteins inPhaseolinae
TABLE 1. Taxonomic classification (sensu Marèchaletat.1978) of thespecies analyzed. RP=RamónPalacios,HOC=Patricia
Hoc, SD= Susana Drewes, MMS=M.del Carmen Menéndez Sevillano.
Sectionor subgenus
Genus Species Id. Number and Origin
RP769:Capital,Salta;RP1275&SD503: Concordia, Entre Ríos.
M.bmcteatum (Nees et Mart.)
Marèchal etBaudet
RP1357: Guemes, Salta; HOC341: Chicoana,
Salta
M.panduratum (Mart,ex Benth.)
Marèchal etBaudet
Section
Macroptilium
RP891: San Fernando,Chaco
M.lathyroides(L.) Urban
M.erythroloma (Mart,ex
Benth.) Urban
RP892:San Fernando,Chaco; RP878,
RP1100 & RP1284:SanIgnacio,Misiones;
RP1286:Candelaria,Misiones
M.longepedunculatum (Benth.)
Urban RP902, RP908 & RP910: Esquina, Corrientes
Macroptilium
RP 767, RP773 &RP775:Capital, Salta;
RP781:La Caldera,Jujuy;RP1014: Jujuy,
Jujuy
M.fraternum(Piper) Juárez
M.arenarium(Bacigalupo)
Drewes etPalacios
RP1299: Gualeguaychu, EntreRios;HOC373
& HOC374:Concepcion,Entre Rios Section
Microcochle RP1090&RP1280:Gral.Alvear,Corrientes;
RP1279:SanMartin,Corrientes;RP1282:
Capital,Misiones
M.psammodes(Lindm.)
DrewesetPalacios
RP844&RP1205:Colon, EntreRíos;RP856:
Concordia,Entre Ríos;RP1073;SantoTome,
Corrientes;RP1287: San Javier,Misiones
M. prostratum(Benth.)Urban
HOC281 &PH282:Rosario de Lerma,Salta P augusti Harms
P.lunatusLvar. sylvester
(Burk.)Baudet RP1210: Ledesma,Jujuy
Section Phaseolus
Phaseolus HOC347, HOC349, HOC351, HOC353, HOC
354, HOC359 & HOC360:Rosariode Lerma,
Salta; RP1010:Capital, Jujuy P. vulgaris Lvar.aborigineus
(Burk.) Baudet
P vuigaris L var. vulgaris MMS110: Iruya,Salta
RP896: SanFemando, Chaco;RP1048: Famaillá, Tucumán; RP1092: Gral. Alvear, Corrientes;RP1209: Ledesma, Jujuy; SD507:
IslaTalayera,Buenos Aires
V.adenantha (G. Mey)
Marèchal etal. Subgenus
Sigmoidotropis
RP880: San Ignacio, Misiones; RP1288 & RP1289: SanJavier, Misiones
V.candida (Veil.)
Marèchaletal.
RP881&RP1296:SanIgnacio,Misiones;
RP1294: San Javier,Misiones V.peduncularis(Kúnth)
Faluc.etRendle
Vigna
RP956: Delta,Buenos Aires; RP1300:
Gualeguaychu, EntreRíos;RP1378: Predelta,
Entre Ríos Subgenus
Vigna V.luteola(Jacq.)Benth.
V. longifolia (Benth.)Verdcourt RP1297:Paso de los libres,Corrientes
Subgenus
Lasiospron V. lasiocarpa (Benth.)Verdcourt RP1285 &RP1295:SanIgnacio,Misiones
RP1513: Asunción,Paraguay
Dolichopsis D.paraguariensisHassler
GenusMacroptilium has three exclusive andcon- (sect.Microcochle). stantbands:onearound 116kDa,oneat25andan¬
otherat19kDa. There aren’tanymarker bandschar- ternsofPhaseolusaugustiandP.lunatus;twelve of these acterizing each section. Only four of the nine species bandsareshared by both species. P.augustihasseven ofMacroptilium here analyzed have marker bands: markerbands,andP lunatus has three.Pvulgarishas four M.bracteatum and M.panduratum (section exclusive andconstantbands, three of these conforms the Macroptilium),and
M.fraternum
and M.prostratum phaseolinprotein placed around 45kDa.Accessionsof Twenty-eight bandsareidentifiedinpolypeptidicpat-mm
Sri,
116HD
66HDtt
>••
i
‘
*
45HDH1
r
11
,
H
31HD
I
£
m
21HDBC=¡>
<=>
<=l
<=3M Pvv Pv3 PI P3 M Mb Me Ml Mf'MprMpi M V3 Ve Vp VI Vio VI3
Fig.1.Seed proteinpatterns(SDS-PAGE)ofsomespecies of Phaseolus, Vignaand Macroptilium:MProteinladder, Pvv P.
vulgarisvarvulgaris,Pva P.vulgarisvaraborigineus,PIP.lunatus,Pa P. augusti,Mb M.bracteatum, MeM.erythroloma,Ml
M.lathyyroides,MfM.fratemum,Mp M.prostratum, Mps M.psammodes, Va Vadenantha, Vc V.candida,Vp Kpeduncularis,
VIV.luteola,Vlo V.longifolia, ViaV.lasiocarpa.Thearrowsindicate: Phaseolin; Phaseolus marker bands;!•*ÿI'
markerbands; Bandsshared by Macroptiliumand Vigna, Bands sharedbyMacroptilium,Vignaand Phaseolus Bands
shared by the four genera.
Macroptilium
P.vulgarishere studied showaphaseolinpattern typeT, tributewith evidencetoestablish theirrelationships.
accordingtothephaseolinclassification of Brownet The results herereportedareinagreementwith mor-al.(\981).This fraction doesn't appear inanyoftheacces- phological observationspreviouslyperformed sions ofP.augustiorP.lunatus (Fig. 1).
Electrophoregramsofthespecies of Vigna show thirty-fourbands.Subgenus Sigmoidotropis has only onemarkerband,and subgenus Vigna hasfour.These
subgenerahavetwobands incommon,while Vigna identification bydifferencesinthepatternsof pres¬ andLasiospron share three peptidic fractions. In sub- ence/absence of their polypeptidic bands. The genusLasiospron, sixexclusiveandconstantbands phenogram shows the species of eachgenusincluded areobserved in all theirspecies. Each Vigna species inunique clusters.Nevertheless,species of Vigna have marker bands by which itcanbe distinguished, are includedin two different clusters in the
Dolichopsispresents12exclusiveproteinbands, phenogram (Fig. 2). The identity of thegenera can sharinganotheronewithMacroptilium and Vigna. also be inferred viewing theMinimum Spanning Tree
The result of the UPGMA, basedonthe Jaccard coefficient, is showninFigure2.Theclusteringpro¬
ducesaverylow distortion (cophenetic correlation value of 0.95). A minimum spanningtree(Fig. 3) has beenderived fromamatrix oftaxonomic distances. Figure 4shows the distribution of the species ina three-dimensional space, delimitedby thefirstthree
principal coordinates derived from aPrincipal Coordinates
Analysis.
(Verdcourt,1971;Marèchal etal. 1978).
Generic
differentiation
andrelationships.Proteinprofilesof four generaallow their clear
D. paraguariensis M. erythroloma Mbracteatum Mlathyroides M. longepedunculatum
M.'arenarium
M.fratemum M,prostratum M. Psarmodes M.panduratum Vadenantha V.candida.
V.peduncularis V.luteola V.longlfolla Vlasiocarpa P.v.vulgaris Iv.aborigineus P. augusti P.lunatus
-c
d
RDISCUSSION
Q
Proteinpatternscorroborate genetic and’taxo¬
S. M. Espert & A.Burghardt, Electrophoretic Analysis of SeedProteinsin Phaseolinae
Numericalanalysis showsagreateraffinitybetween
Macroptiliumand Vigna. This fact is inagreementwith
morphological(Marèchaletal.op. cit.;Verdcourt 1970) andmolecular data (Caicedoetal. 1999).
InUPGMAandMinimumSpanningTreediagrams
(Fig. 2and 3), the species of Vigna appear inseparate groups,showingthat individuals ofsubgenera Vigna and Sigmoidotropisare moresimilartoMacroptilium thantosubgeneraLasiospron;as waspointedoutby
Marèchaletal. (1978) basedonmorphologicaldata.
Dolichopsis isthemoredistantgenus.Previous worksplace D.paraguariensis closerto Vignasub¬ genus Vigna (Marèchaletal. op.cit.) or to Vigna
subgenusSigmoidotropis and another genus of
Phaseolinae,StrophostylesElliot,notanalyzed here (DelgadoSalinasetal.1999;Goeletal. 2002). The inclusion of genera andspecies that don’t grow in Argentina will improvethe understanding of the placement ofthis monotypicgenus.
(Figure 3).The position of the speciesonthe space
delimitedby the three firstPrincipalCoordinates (Fig. 4) shows that each genusconstitutesadefinedgroup. Thespecies belongingtoaparticulargenusareposi¬ tionedas awell-definedconstellation in differentre¬ gions ofthe diagram. This indicatesa greatersimilar¬ ity
between
species from thesame genusthan be¬ tweenspecies of different genera.Phaseolus species composeawell-definedgroup inall the analysis here performed. Ordination analy¬ ses show that Phaseoluslunatus is the Phaseolus
species thatseemstobemostclosely related with theother genera (Fig. 3 and 4). This result isinagree¬ mentwiththeobservationsonflowers: P. lunatusones aresmaller than those of other species ofPhaseolus, beingits size similartothe flowers of M. lathyroides andV,peduncularis(Marèchaletal.op.cit).
P.augusti
oogP.v.vulgaris °. lunatus V.longifolia
. .:e:
P.v.aborigineus
Infrageneric
differentiations
andrelationships.Phaseolus L. emend Verdcourt.
Thisgenusis the focus of many works because ofits economicimportance. This isincontrast tothe other threegenera
analyzed
here, whichareless stud¬ ied than Phaseolus.The phenogram basedonseedprotèin analysis
shows that P. lunatus constitutesacluster with P. augusti, distant from P.vulgaris(Fig. 2). One of the greatestdifferences ofP.vulgaris profilesis the pres¬ ence ofaconspicuousgroup ofbands (phaseolin protein),which is absent in the other Phaseolusspe¬ cies(seeblackarrowinFig.1). Otherstudies also showed that Andean wildspeciesofPhaseolus (like P.augusti), don’tpresentthisphaseolin (Maquet et al. 1999).Also,Maquet (op. cit.)reportedthat these species are moreclosely relatedtoP.lunatus,asis shown here. This result agrees with other molecular data (Caicedo etal.1999;Delgado Salinasetal. 1999). Thetwovarieties ofP. vulgaris (varvulgarisand varaborigineus) differ only inonepolypeptidicband. Thishighaffinitysupportsthe inclusion of
both
taxainthe same species, inagreementwiththe criteria adopted byBaudet,who studied morphological data (Palacios&Vilela,1993).
Onlycultivated forms ofP.vulgarisvarvulgaris areknown.These cultivated formsofbeansarethe result ofalongdomestication process.Thispractice could leadtoareduction of thevariabilitybecauseof geneticdrift, andanincreaseinthedifferentiation,so one can expect adifferentpattern between cultivated
V. adenantha
M.arenarium
*V. candida
V.peduncularis
D.paraguariensis
.M.bracteatum *M. panduratum
M.lathyroides M. fratemum
M.erythroloma M. psammodes
M.prostratum
Fig. 3.MinimumSpanning Treederivedfromamatrix of
taxonomic distances.
-*7/8
Vigna
•t
9 10
Dolichopsis
C2>
%
Phaseolus
3 l4
»
lacroptilium
Fig.4.Distribution of thespecies inathree-dimensional space,
delimited bythe first threeprincipal .coordinates,derived from
aPrincipal Coordinates Analysis.(1 P.vulgarisvar vulgaris, 2 P.vulgarisvar aborigineus,3 P. augusti, 4P. lunatus,5 D.
paraguariensis, 6 V. luteola,7 V.longifolia, 8 V.lasiocarpa,9
V.candida, 10 V. adenantha,
.
11 V.peduncularis, 12M.panduratum, 13 Merythroloma,14M.bracteatum, 15 M.
arenarium, 16M. longepedunculatum, 17 M. lathyroides, 18
formsand related wildspecies.This would be the ing to four genera ofPhaseolinae (Phaseolus, reasonofthegreat differences observed between Dolichopsis, Vigna andMacroptilium),which had Phaseolus species, whicharesimilartothosefound neverbeen analyzed together byusingmolecular between sectionsand subgenerainMacroptilium markers. Seedprotein electrophoreticbandingpat¬
ternsallowed therecognitionofageneticbasis of the genericdivisions, whichwereproposed using and Vigna (Fig.2)
Macroptilium(Bentham) Urban.
Therearevery fewprevious studiesonspecies morphologicalandpalinologicaldata. This work sup-ffornthis genus, and almostnoneusingmolecular portsthe subgeneric divisionsinPhaseolus and techniques. Drewes (1995 & 1996) pointedoutthe
ViSna
(sensu Marèchal et al.), but not inseparation of Macroptilium in the sections Macroptilium.Besides,the identification of all spe-Microcochle andMacroptilium,asproposedby ciesofthe8enera
nSna-
DolichopsisandPhaseolus, Lackey (1983) basedonmorphological observations. andmostofMacroptiliumispossible using marker The phenogram hereperformeddonotshow clearly bands- An electrophoretic analysis includingspecies thisseparation, neither do theMinimumValue Tree ofother Americancountries is inprogressinourlabo-andthe Principal CoordinatesAnalysis.
ratorT’
and wiU be veiTimportantinordertogeta SpeciesofsectionMacroptiliumarehighlydif-ireater
knowledgeof the genetics of the group, whichferentbetweeneachother,regardingmorphological 1Sessential foritsbiotechnologicalimprovementand data. Phenogram basedonelectrophoretic resultsin germplasmmanagement.
particular shows that M.lathyroides and M.longepedunculatum belonging to sect. Macroptiliumclearly havemorecloselyrelationships withspeciesofsect.Microcochle. It isnotpossible tomakecomparisonsabout infrageneric data with
ACKNOWLEDGEMENTS
Financial support from ConsejoNacional de previous works based onDNA sequence data. Investigaciones Científicas y Técnicas and Delgado Salinasetal. 1999 and Goeletal. 2002are Universidad de BuenosAires,both of Argentina,aré theonlytwomolecularsystematicresearchers who gratefully acknowledged. Shirley M. Espert enjoyed included species ofMacroptilium,but they onlyana- ascholarshipfromthe Universidad de BuenosAires,
lyzedtwospecies. Vigna Savi.
Electrophoretic results
show
that V.luteolaformsagroup withspecies of subgenus Sigmoidotropis, and
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