gene expression data
Discriminative local subspaces in gene expression data for effective gene function prediction
... predict gene function, as has been shown by several works (Brown et ...the data to high-dimensional spaces compli- cates any interpretation of the SVM ...for gene function discovery as under- ...
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Breast cancer biomarker discovery in the functional genomic age: A systematic review of 42 gene expression signatures
... cancer gene expression studies, in an effort to identify the most relevant breast cancer biomarkers using a meta-analysis ...cancer gene expression studies. Data mining analysis of ...
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Ant colony optimization for predicting gene interactions from expression data
... Inferring gene interaction networks from gene expression data is an important task in systems biology ...research. Gene interaction networks play an important role to understand how ...
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Hierarchical information representation and efficient classification of gene expression microarray data
... The most important element for the whole framework prediction performance is the metagenes generation from gene expression data. In all the performed experiments, in- troducing metagenes consistently ...
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Cooperative binding of transcription factors promotes bimodal gene expression response
... of gene expression for activating transcriptional switches, by means of master equation formalism and computer ...mean expression levels were not affected differently by the acting mechanism, we ...
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TítuloAnalyses of molecular markers and gene expression in crustacean species
... We employed 17 microsatellite loci to characterise the genetic diversity and the popula- tion structure of P. serratus. A total of 252 samples from ten dierent localities, including the Atlantic-Mediterranean transition ...
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Epigenetic regulation of clonally variant gene expression in Plasmodium falciparum
... variant gene expression is fundamentally different from adaptation through directed transcriptional responses (Supplemental ...variant expression/selection and adaptation via directed transcriptional ...
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Integrative analysis of DNA methylation and gene expression in Schizophrenia
... lincRNA gene. Importantly, spe- cific LncRNA expression profiles have been shown to be differentially expressed in ...SHANK2 gene encodes for a protein with an important role during ...SHANK2 ...
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Integrative analysis of methylation and expression data
... 2 En nuestro trabajo primero generaremos un set de análisis de datos de Cáncer (en concreto CRC) a partir de diferentes sets de datos públicos de GEO. Este conjunto no tiene por que excesivamente coherente para su ...
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A Systems Approach Uncovers Restrictions for Signal Interactions Regulating Genome wide Responses to Nutritional Cues in Arabidopsis
... the gene expression models described in the previous section using a binary ...similar expression patterns (successions of 0, 1 or 21) could be grouped in the same model of regulation (independent of ...
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Time-course analysis of cyanobacterium transcriptome: detecting oscillatory genes
... of data points in a time series expression ...circadian expression pattern in time series data is challenging, because the measured data are often non- ideal, and efficient algorithms ...
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The rules of gene expression in plants: Organ identity and gene body methylation are key factors for regulation of gene expression in Arabidopsis thaliana
... of gene expression in Arabidopsis. The data indicate that DNA methylation within the body of Arabidopsis genes is a key factor that may determine or negatively influence the capacity of genes to ...
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TítuloA semantic interoperability approach to support integration of gene expression and clinical data in breast cancer
... of gene expression data in the SIL was a crucial task to facilitate the use of diagnostic classifier tools in the EURECA ...the gene expression patterns; the algorithm is unable to ...
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Osmoregulated TAQ polymerase gene expression in Escherichia coli
... I) gene was cloned into the pOSEX4 plasmid under the osmo-induc- ible promoter proU and subsequently expressed into the Escherichia coli MKH13 ...I expression in this system, which is under the control of ...
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Genomics and Systems Biology Approaches in the Study of Lipid Disorders
... identify gene coexpression modules summarizing the main trends in a variation on the transcriptome data and subsequently the coexpression modules can be linked to clinical traits or binary outcomes and DNA/ ...
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