Metabolic model
Development and validation of a genome scale metabolic model for the malolactic bacterium oenococcus oeni
... Genome-scale metabolic model (GEM) of ...The model includes 914 reactions, 792 metabolites and 512 ...the model showed a prediction accuracy of 86%, with an F-score value of ...
158
Development, calibration and validation of a dynamic genome scale metabolic model of saccharomyces cerevisiae
... the metabolic model. In addition, the metabolic model’s growth rate and glucose consumption values cannot be used to define the feed rate, because the parameter estimation cannot be performed until ...
106
Harnessing the systemic response of oenococcus oeni to ph and ethanol by experimental data integration into a genome scale metabolic model
... genome-scale metabolic models (GSMM) by a system-based approach: iSM454, the first GSMM developed for ...this model that was developed in this thesis and is mass and charge ...
157
Dynamic genome scale metabolic modeling of the yeast Pichia pastoris
... genome-scale metabolic model of ...genome-scale metabolic models [43] and manually curated it to yield realistic flux distribu- ...the model was calibrated using experimental data from eight ...
21
Metabolic Impact Analysis’ for Urban Planning
... a metabolic model is previously available – a confined intervention area has to be defined to initiate the MIA ...the metabolic dimension under ...the metabolic impact analysis may well ...
26
A metabolic view of amphibian local community structure: the role of activation energy
... Out of the 52 phenological community data-series analyzed, 35 fit significantly the metabolic model, with a percentage of the explained variance ranging from 27.5 to 87.4%. We considered the case 5 (Arzabe ...
13
Control-oriented model with intra-patient variations for an artificial pancreas
... UVA/Padova metabolic model around several operat- ing points defined by steady-state glucose concentrations achieved by only accommodating the insulin infusion ...
10
Tamiz bioqumico y metabolmico en el estudio de los trastornos del desarrollo intelectual en Mxico
... Metabolomics could be used to identify unreported metabolic alterations associated with IDD. Metabolo- mics refers to the comprehensive measurement of small molecules, typically <1 500 daltons (e.g., sugars, ...
6
Albuminuria and Glomerular Filtration Rate in Individuals with Type 1 Diabetes Mellitus: Contribution of Metabolic Syndrome
... of metabolic syndrome has been described in patients with type 1 diabetes mellitus as the disease progresses over ...between metabolic syndrome, albuminuria, and glomerular filtration rate, as well as to ...
7
Energy balance of Octopus maya fed crab or an artificial diet
... The metabolic exponent obtained (b ¼ ...and metabolic rate in octopuses, such as in some fish species and aquatic invertebrates (Clarke and Johnston, 1999), is close to an exponent ...the metabolic ...
8
El sndrome metablico, la diabetes y la enfermedad de Alzheimer
... The metabolic syndrome (MS) is a cluster of metabolic abnormalities that has been controversially associa- ted with Alzheimer’s disease (AD), so the purpose of this re- port was to investigate the ...
7
Dynamic genome scale metabolic modeling of the yeast Pichia pastoris
... GSMs are computable structures that represent the entire metabolism of a cell or microbial community (Palsson, 2015; Thiele & Palsson, 2010). Their applications include understanding cellular behavior under different ...
105
Acido base NEJM 2014
... anion-gap acidosis occurs when the decrease in bicarbonate ions corresponds with an increase in chloride ions to retain electroneutrality, which is also called hyperchloremic metabolic acidosis. This type of ...
12
Sheathless CE MS based metabolic profiling of kidney tissue section samples from a mouse model of Polycystic Kidney Disease
... PCA model built after reprocessing the data without the outlier is presented in ...The model requires just three principal components to cover the first 50% of the variance, while the first two principal ...
9
Identifying metabolic markers for the hemibiotrophic life style of Phytophthora infestans
... Network analysis using metabolites as nodes and edges as reactions was 21".. achieved for all the metabolic networks constructed: whole metabolic network and 22".[r] ...
38
Aerobic power and flight capacity in birds: a phylogenetic test of the heart size hypothesis
... phylogenetic model with a white-noise model (star phylogeny) indicated that the former better explains the data than the latter (OU model, AICc= − ...white-noise model, AICc= − ...the ...
7
Genome scale metabolic modeling reveals the metabolic potential of three Type II methanotrophs of the genus Methylocystis
... The experimental biomass yields of Methylocystis hirsuta were close to its maximal theoretical yields (both in the case of nitrate and ammonium used as carbon sources). This assumption of optimal yields, even if it is ...
30
Metabolic Engineering – T. Scheper and Jens Nielsen
... Continuous cultures that extend for fewer than 20 generations allow for quantitative physiological investigations in a defined steady state. Experiments of longer duration become the study of evolution in action. In ...
170