Phylogenetic analysis
Top PDF Phylogenetic analysis:
An Approach to the Identification and Phylogenetic Analysis of Emerging and Hemorrhagic Fever Viruses.
... including phylogenetic, phylogeographic, and phylodynamic ...genetic analysis is the basis of virus evolutionary genetics. Phylogenetic analysis of viral sequences proceeds as outlined in ...
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Molecular characterization and phylogenetic analysis of a Squash leaf curl virus isolate from Baja California Sur, Mexico
... DNA-A phylogenetic analysis, including the NW and OW groups as well as other cucurbit ...the analysis of the intergenic region, the TAATATTAC sequence at the hairpin structure of geminiviruses was ...
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Comparative and phylogenetic analysis of a novel family of Enterobacteriaceae associated genomic islands that share a conserved excision/integration module
... Our phylogenetic analysis, based on the nucleotide sequence of the integrase open reading frames reveals that island gene content corre- lates with the evolution of the ...the phylogenetic ...
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Colonization of the coastal xeric habitats of Colombia by Dwarf Swamp Frogs (Anura: Leptodactylidae: Pseudopaludicola) - a molecular phylogenetic analysis
... Phylogenetic analyses were performed using only Bayesian methods and, because our combined data included two ribosomal genes with secondary structure (12S, and 16S), we performed a partitioned analysis ...
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Phylogenetic Analysis Using Parsimony
... ALTNEX also specifies a NEXUS TREES block, but no translation table is used (the full taxon names are included in each tree description). FREQPARS requests a treefile for the FREQPARS [r] ...
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TítuloMolecular organization and phylogenetic analysis of 5S rDNA in crustaceans of the genus "Pollicipes" reveal birth and death evolution and strong purifying selection
... ICRs analysis, in addi- tion to other sequences from other crustaceans available from EMBL/GenBank/DDBJ: Parhyale hawaiensis [FN434137]; Proasellus coxalis [Y14281]; Asellus aquati- cus [AJ243001] Calanus ...
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Five new Mexican species of the flea genus Strepsylla Traub, 1950 (Siphonaptera: Ctenophthalmidae: Neopsyllinae: Phalacropsyllini) with a phylogenetic analysis
... Frontal tubercle present. Genal comb consisting of 2 overlapping spiniform bristles. Labial palpus extending distally to fore trochanter. Post-antennal region with 2 rows of approximately 4–(4)5 setae; these rows are ...
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Galaxy population identification with a phylogenetic approach.
... a phylogenetic approach as a novel and robust tool capable of detecting galaxy populations (GPs) based on their chemical ...a phylogenetic tree that connects galaxies through features we call ...the ...
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A Polyphasic and Taxogenomic Evaluation Uncovers Arcobacter cryaerophilus as a Species Complex That Embraces Four Genomovars
... the phylogenetic analysis of the cpn60 gene, together with the shared intermediate levels of DNA-DNA hybridization observed between the strains lead the authors to conclude that despite ...
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Filogenia molecular, sistemática y evolución de los Chrysomelinae australianos (Coleoptera, Chrysomelidae)
... Nishikawa T, Vaughan DA, Kadowaki K-i 2005 Phylogenetic analysis of Oryza species, based on simple sequence repeats and their flanking nucleotide sequences from the mitochondrial and chl[r] ...
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Bioprospecting study of cultivable prokaryotic fraction from Manaure solar saltern, La Guajira, Colombia
... Sequencing Analysis (MLSA) to solve this problem (Machado, Cardoso, Giubergia, Rapacki, & Gram, ...of phylogenetic analysis and species circumscription based on whole-genome analysis have ...
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Genotype/subgenotype distribution of hepatitis B virus among hemodialysis patients with chronical hepatitis B
... study, phylogenetic analysis of HBV pol gene sequences isolated from Turkish HD pa- tients revealed subgenotype D1/ayw2 constitutes the majority of the genotype D circulating in ...
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TítuloLong term evolution of 5S ribosomal DNA seems to be driven by birth and death processes and selection in "Ensis" razor shells (Mollusca: Bivalvia)
... a phylogenetic analysis of multigene family members, which will reveal a between-species gene clustering pattern; and an examination of gene sequence divergence levels, in which case a relatively high ...
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Phylogenetic and molecular clock inferences of cyanobacterial strains within Rivulariaceae from distant environments
... molecular-based analysis has attempted to disen- tangle the evolutionary relationships between Calothrix and closely related genera (Hongmei et ...a phylogenetic analysis that strains from calcareous ...
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The family of DOF transcription factors: from green unicellular algae to vascular plants
... Abstract This article deals with the origin and evolu- tion of the D O F transcription factor family through a phylogenetic analysis of those D O F sequences identi- W ed from a varie[r] ...
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Characterization and phylogenetic relationships of strains of Dengue type 1 virus from Costa Rica
... Abstract: Phylogenetic analysis of the envelope gene sequence (E) of three isolated Dengue virus type 1 (DEN- 1) sequences from the Costa Rican 1993 epidemic was ...
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Native bradyrhizobial symbionts of Lupinus mariae-josephae, a unique endemism thriving in alkaline soils in Eastern Spain
... the analysis of the genomic of Lmj representative ...comparison analysis of the draft genomic sequences of Lmj strains and related Bradyrhizobium species grouped in Clade I, revealed a high genomic homology ...
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Estudio de las relaciones genómicas de especies poliploides y diploides del género Helianthus
... Soltis D. E., Soltis P. S. 1998. Choosing an approach and an appropriate gene for phylogenetic analysis. In: Soltis D. E., Soltis P. S., Doyle, J.J. (eds) Molecular Systematics of Plants II: DNA Sequencing. ...
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Challenges for the design of effective vaccines or drugs against Cholera and Tuberculosis: Possible contributions from omics and bioinformatics Yuliet Mazola , Arielis Rodrguez , Rolando Rodrguez
... Certainly, the genome sequence of V. cholerae is one of the most promising results to develop better vaccines, new diagnostics methods and treatments of cholera. Identifying the function of hypothetical proteins and the ...
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