List of connectors
Table 5-2 List of connectors
SN. PIN Number Function Description
PA1 96 Data board connector, digital signals PA2 96 Data board connector, analog signals
PB1 96 Drive board connector, digital signals and part of optics signals PB2 96 Drive board connector, part of optics signals and motor drive
signals
PB3 96 Drive board connector, drive signals of motors, valves, pumps, and heaters
J1 8 RS-232 LAN port
J2 9 Reserved for COM port debugging
J3 10 Multi-functional JTAG port, debugging or upgrading MCU programs of autoloader board
J4 4 RS-422 COM port, COM port of autoloader board J5 8 Connector for the key board and indicator board J6 6 Right door switch, and optical shielding box switch J7 6 Laser control board connector
J8 8 Reserved for side fluorescence channel (SF) J9 8 side scatter channel (SS)
J10 8 Connector for forward scatter channel (FS)
J11 5 HGB module connector
J12 8 A+/- 12V connector
J13 3 AC120V connector
J14 6 Temperature sensor connector J15 12 Volumetric board connector
J16 34 Connector for level sensors and associated photocouplers
J17 No in use
J18 24 Connector for photocouplers 1-6 J19 24 Connector photocouplers 7-12 J20 24 Connector photocouplers 13-18 J21 3 Reserved for DC mix motor J22 8 Connector stepping motors 1-2 J23 8 Connector stepping motors 3-4 J24 8 Connector stepping motors 5-6 J25 8 Connector stepping motors 7-8
J26 No in use
J27 4 Connector for heater 2 J28 4 Connector for heater 1 J29 20 Connector for pumps 1-7 J30 20 Connector for valves 1-10
J36 6 Connector for autoloader board power
J37 4 D+5V connector
Data board slots (PA1 and PA2)
Data board slots are two 96pin DIN 41612 connectors.
Connector type: AMP VME female connector 3*32PIN vertical connection Model: 5535043-4
Table 5-3 Definition of PA1 for mother board
Column A Column B Column C
16 TMS_TO_DRV TMS_TO_AS UART3_TO_PC
17 TCK_TO_DRV TCK_TO_AS UART3_TO_DAT 18 DATA_TO_DRV DATA_TO_AS DGND
19 DATA_FROM_DRV DATA_FROM_AS DGND
20 DGND UART1_TO_DAT+ UART1_TO_AS+
21 DGND UART1_TO_DAT- UART1_TO_AS-
22 UART0_TO_DRV DGND DGND
23 UART0_TO_DAT DGND DGND
24 DGND DGND #SUCK_KEY
25 DGND #VM_ON DGND
26 DGND #RBC_START #BUZ
27 DGND #RBC_STOP #COUNT_KEY
28 DGND #WBC_START FAULT
29 DGND #WBC_STOP READY
30 DGND DGND OPTI_DOOR
31 DGND #LASER_ON #RIGHT_DOOR
32 DGND DGND #INSERT_DOOR
Table 5-4 Definition of PA2 for mother board
Column A Column B Column C
Connector J1 for LAN port
Connector type: RJ-45 female connector with iron casing Model: 5406217-1
Table 5-5 Definition of J1 for mother board Definition Description
1 ET_TP+ Transmit, positive
2 ET_TP- Transmit, negative
3 ET_RP+ Receive, positive
4 ET-NGP Receive, virtual ground 5 ET-NGP Receive, virtual ground
6 ET_RP- Receive, negative
7 ET-NGR Receive, virtual ground 8 ET-NGR Receive, virtual ground
Connector J2 for COM port
Connector type: DB9 male / female connector
Table 5-6 Definition of J2 for mother board (male connector)
Pin Definition Description
1 NC
2 RXD/TXD Send/receive 3 TXD/RXD Receive/send 4 NC
5 GND 6-9 NC
Table 5-7 Definition of J2 for mother board (female connector)
Pin Definition Description
1 GND 2 NC
3 TXD/RXD Send/receive 4 RXD/TXD Receive/send 5-9 NC
Connector J3 for JTAG
Connector type: HEADER WTB 2.54MM DIP2*5 TOP 70246SERIES Model: 70246-1001, MOLEX
Table 5-8 Definition of J3 for mother board
Pin Definition Description
1 D3V3 2 GND 3 GND
4 TCK JTAG clock
5 TMS JTAG status select
6 DATA_FROM_AS JTAG data to data board 7 DATA_TO_AS JTAG data to drive board 8 NC
9 GND 10 NC
Connector J6 for aspirate key and door switch on/off checking Connector type: HEADER WTB 2MM DIP1*6SIDE PHSERIES Model: B6B-PH-K 2MM 'JST'
Table 5-9 Definition of J6 for mother board
Pin Definition Description
1 #SUCK_KEY NC 2 GND
3 #RIGHT_DOOR Right door switch on/off 4 GND
5 OPTI_DOOR optical shielding box switch 6 GND
Connector J4 for autoloader board signal
Connector type: HEADER WTB 2MM DIP1*4SIDE PHSERIES Model: B4B-PH-K 'JST'
Table 5-10 Definition of J4 for mother board
Pin Definition Description
1 UART2_TO_AS+ 5474 serial port 2 to positive end of sample board data
2 UART2_TO_AS- 5474 serial port 2 to negative end of
Connector J5 for indicator board
Connector type: HEADER WTB 2MM DIP1*8 TOP PHSERIES Model: B8B-PH-K 'JST' 2MM
Table 5-11 Definition of J5 for mother board
Pin Definition Description
1 D+5V
2 #COUNT_KEY Start sampling switch, effective low 3 #INSERT_DOOR Insert STAT switch, effective low
4 FAULT Fault status indicator light, effective high 5 READY Ready status indicator light, effective high 6 NC
7 #BUZ Buzzer driven
8 GND
Connector J7 for laser board
Connector type: HEADER WTB 2.5MM DIP1*6SIDE XHSERIES Model: B-6B-XH-A 'JST'
Table 5-12 Definition of J7 for mother board
Pin Definition Description
1 NC 2 AGND
3 LASER_CURT Laser current feedback, analog signal 4 A+12V
5 #LASER_ON Laser source on/off signal, effective low 6 D+5V
Connector J9 and J10 for pre-amplification board
Connector type: HEADER WTB 2.5MM DIP1*8SIDE XHSERIES Model: B8B-XH-K 'JST'
Table 5-13 Definition of J9, J10 for mother board
Pin Definition Description
1 AGND
2 FS/SS FS/SS signal input, analog signal 3 AGND
4 AGND
5 A-12V
6 AGND Connecting inner shield of cable 7 A+12V
8 MHOLE Connecting external shield of cable
Connector J11 for HGB module
Connector type: HEADER WTB 2MM DIP1*5SIDE PHSERIES Model: B5B-PH-K 'JST'
Table 5-14 Definition of J11 for mother board Pin Definition Description
1 HGB+ HGB light drive,
Connector J12 for analog A12V
Connector type: HEADER WTB 4.2MM DIP2*4 SIDE, 5566 serial Model: 1-794509-1 'JST'
Table 5-15 Definition of J12 for mother board Pin Definition Description 1 AGND
2 NC 3 NC 4 NC
Connector type: HEADER WTB 2.5MM DIP1*3 TOP XHSERIES Model: B-3B-XH-A 'JST' 2.5MM
Table 5-16 Definition of J13 for mother board Pin Definition Description 1 AC120V_A A end of 120V AC 2 NC
3 AC120V_B B end of 120V AC
Drive board slots: PB1, PB2 and PB3 DIN41612, 96PIN female
Definition of PB1-PB3 signals:
Note: On the mother board, PB1 is placed laterally, with column A under it, and row 1 at left side. Since the drive board and mother board is connected vertically, column A should be arranged at the nearest joint side of board.
Table 5-17 Definition of PB1 for mother board
column A column B column C
1 HT1_SA HT1_SB AMBI_SA
2 HT2_SA HT2_SB AMBI_SB
3 POSI_PRESS NEGA_PRESS DGND
4 DGND DGND DGND
18 #LIQ1 #LIQ2 TMS_TO_DRV
19 #LIQ3 #LIQ4 TCK_TO_DRV
20 #LIQ5 #LIQ6 DATA_TO_DRV
21 #LYSE_SENSOR #WASTE_SENSOR DATA_FROM_DRV
22 #LS_ON DGND DGND
23 DGND DGND DGND
24 OP17_CTRL OP17_STS UART0_TO_DRV
25 OP18_CTRL OP18_STS UART0_TO_DAT
26 OP19_CTRL OP19_STS DGND
27 OP20_CTRL OP20_STS DGND
28 OP1_CTRL OP1_STS OP2_CTRL
29 OP2_STS OP3_CTRL OP3_STS
30 OP4_CTRL OP4_STS OP5_CTRL
31 OP5_STS OP6_CTRL OP6_STS
32 OP7_CTRL OP7_STS OP8_CTRL
Table 5-18 Definition of PB2 for mother board
column A column B column C
1 OP8_STS OP9_CTRL OP9_STS
2 OP10_CTRL OP10_STS OP11_CTRL
3 OP11_STS OP12_CTRL OP12_STS
4 OP13_CTRL OP13_STS OP14_CTRL
5 OP14_STS OP15_CTRL OP15_STS
6 OP16_CTRL OP16_STS DM_ON
7 DGND DGND DGND
26 PGND SM5_AN SM5_AN
Table 5-19 Definition of PB3 for mother board
column A column B column C
29 V31 V32 V33
30 V34 V35 V36
31 V37 V38 V39
32 V40 NC NC
Connector J14 for temperature sensor
Connector type: HEADER WTB 2.5MM DIP1*6 TOP XHSERIES Model: B-6B-XH-A 'JST'
Table 5-20 Definition of J14 for mother board
Pin Definition Description
1 HT1_SA 2 HT1_SB
both ends of thermistor of heater 1
3 HT2_SA 4 HT2_SB
both ends of thermistor of heater 2
5 AMBI_SA 6 AMBI_SB
both ends of thermistor of environment temperature
Connector J15 for sensors of volumetric board and pressure control board Connector type: HEADER WTB 2MM DIP1*12 TOP PHSERIES
Model: SIP12TD-B12B-PH-K 'JST'
Table 5-21 Definition of J15 for mother board
Pin Definition Description
1 P+12V 2 PGND 3 DGND
4 POSI_PRESS Pressure chamber (pressure) signal 5 NEGA_PRESS Vacuum chamber (vacuum) signal 6 DGND
7 #VM_ON Volumetric optics is on, effective low
8 #RBC_START RBC volume measurement starts, effective low 9 #RBC_STOP RBC volume measurement stops, effective low 10 #WBC_START WBC volume measurement starts, effective low 11 #WBC_STOP WBC volume measurement stops, effective low
Table 5-22 Definition of J16 for mother board
Pin Definition Description
1 D+5V
2 #LIQ1 LIQ1status, effective low 3 #LIQ2 LIQ 2 status, effective low 4 #LIQ3 LIQ 3 status, effective low 5 #LIQ4 LIQ 4 status, effective low 6 #LIQ5 LIQ 5 status, effective low
7 #LS_ON Control signal for liquid level board 8 GND
9 NC 10 NC
11 #LIQ6 LIQ 6 status, effective low 12 GND
13 #LYSE_SENSOR LYSE level sensor, status, i, effective low 14 GND
15 #WASTE_SENSOR Waste level sensor status, effective low 16 GND
17 NC 18 NC
19 OP17_CTRL Optics 17 control 20 OP17_STS Optics 17 status 21 GND
22 GND
23 OP18_CTRL Optics 18 control 24 OP18_STS Optics 18 status 25 GND
26 GND
27 OP19_CTRL Optics 19 control 28 OP19_STS Optics 19 status 29 GND
30 GND
31 OP20_CTRL Optics 20 control 32 OP20_STS Optics 20 status 33 GND
34 GND
Connector J18, J19, J20 for optics of position sensor
Connector type: HEADER WTB 2.0MM DIP2*12 TOP Model: B24B-PHDSS-B (LF) (SN) 'JST'
Table 5-23 Definition of J18 for mother board
Pin Definition Description
1 OP1_CTRL Optics 1 drive
13 OP4_CTRL Optics 4 control 14 OP4_STS Optics 4 status
Table 5-24 Definition of J19 for mother board
Pin Definition Description
1 OP7_CTRL Optics 7 drive
18 OP11_STS Optics 11 status 19,20 DGND
21 OP12_CTRL Optics 12 drive 22 OP12_STS Optics 12 status 23,24 DGND
Table 5-25 Definition of J20 for mother board
Pin Definition Description
1 OP13_CTRL Optics 13 drive 10 OP15_STS Optics 15 status 11,12 DGND
13 OP16_CTRL Optics 16
14 OP16_STS Optics 16 status 15,16 DGND
17-24 NC
Connector J21 (reserved) for DC mix motor
Connector type: HEADER WTB 2MM DIP1*3 TOP PHSERIES Model: B3B-PH-K 'JST'
Table 5-26 Definition of J21 for mother board Pin Definition Description
1 DM_ON DC Motor drive
2 NC 3 DGND
Connector J22, J23, J24, J25 for stepping motors Each connector connects two motors.
Connector type: HEADER WTB 2.54MM DIP1*8 TOP XHSERIES Model: B-8B-XH-A 'JST' 2.54MM
Table 5-27 Definition of J22 for mother board
Pin Definition Description
1 SM1_AP A-phase coil drive , motor 1
Table 5-28 Definition of J23 for mother board
Pin Definition Description
1 SM3_AP A-phase coil drive , motor 3
Table 5-29 Definition of J24 for mother board Pin Definition Description 1 SM5_AP A-phase coil drive , motor 5
Table 5-30 Definition of J25 for mother board
Pin Definition Description
1 SM7_AP A-phase coil drive , motor 7
Connector J27, J28 for heaters
Connector type: HEADER WTB 2.5MM DIP1*4 TOP XHSERIES Model: B-4B-XH-A 'JST'
Table 5-31 Definition of J27 for mother board Pin Definition Description 1 P+24V
2 HT1_ON Heater 1 drive
3,4 Heater 1 control
Table 5-32 Definition of J28 for mother board Pin Definition Description 1 P+24V
2 HT2_ON Heater 2 drive
3,4 Heater 2 control
Connector J29, J30, J31, J32, J33 for pumps and valves Valves and pumps have five double-row PH-model connectors.
Connector type: HEADER WTB 2MM DIP2*10 TOP PHDSERIES Model: B20B-PHDSS-B(LF)(SN)
Table 5-33 Definition of J29 for mother board Pin Definition Description 1~6 NC
7 PUMP7 Pump 7 drive 8 P+12V
9 PUMP6 Pump 6 drive 10 P+12V
11 PUMP5 Pump 5 drive
Table 5-34 Definition of J30 for mother board Pin Definition Description 1 V1 Valve 1 drive
3 V12 Valve 12 drive
Table 5-36 Definition of J32 for mother board Pin Definition Description 1 V21 Valve 21 drive
18 P+12V
19 V30 Valve 30 drive 20 P+12V
Table 5-37 Definition of J33 for mother board Pin Definition Description 1 V31 Valve 31 drive
Connector type: HEADER WTB 4.2MM DIP2*2 TOP 5566SERIES Model: 3928-1043
Table 5-38 Definition of J37 for mother board Pin Definition
1 D+5V
Connector type: HEADER WTB 4.2MM DIP2X5 TOP 5566SERIES Model: 39-31-0108
Table 5-39 Definition of J35 for mother board Pin Definition
1 P+24V
Connector type: HEADER WTB 2.5MM DIP1*2 TOP XHSERIES Model: B-2B-XH-A 'JST'
Table 5-40 Definition of J34 for mother board Pin Definition
1 P+12V 2 PGND
Connector J36 for power (autoloader board)
Connector type: HEADER WTB 4.2MM DIP2*3 TOP 5566SERIES Model: 3928-1063
Table 5-41 Definition of J36 for mother board Pin Definition
1 D+5V