[PDF] Top 20 Trabajo Colaborativo Fase 2 Grupo 100412_116
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Reproducible detection of disease-associated markers from gene expression data
... size from normal group), a larger value of b (sampling size from disease group) is better at discriminating these sce- narios, and (ii) a smaller value of a tends to be ...because disease ... See full document
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Differential Regulation of Functional Gene Clusters in Overt Coronary Artery Disease in a Transgenic Atherosclerosis-hypertensive Rat Rodel
... of reproducible differential gene regulation in overt-CAD in end-stage Tg53 rat hearts compared with age-matched non-overt CAD (non- endstage Tg53-reg) and attenuated non-overt CAD (non-endstage Tg53-lsd) ... See full document
9
Inflammatory profiling of patients with familial amyloid polyneuropathy
... liver from mice that presented no amyloid deposits exhibited altered expression of diverse transcripts associated with innate immunity and inflam- mation ...Our data and the one from ... See full document
10
Prognostic stratification improvement by integrating ID1/ID3/IGJ gene expression signature and immunophenotypic profile in adult patients with B-ALL
... backbone markers present in all tubes, allowing the identification of the blast population (CD34, CD19 and CD45), characterization markers useful to distinguish B- develop- ment patterns (CD20, CD10, kappa, ... See full document
10
Complement 3+-astrocytes are highly abundant in prion diseases, but their abolishment led to an accelerated disease course and early dysregulation of microglia
... μL from an assay mix containing DNA-assay loading reagent, as well as forward and reverse primers (10 pmol·μL − 1) was loaded into each detector ...program. Data were collected using BioMark Data ... See full document
17
Determining Physical Mechanisms of Gene Expression Regulation from Single Cell Gene Expression Data
... uses data points as ...experimental data, we determined that these latter two methods provide more accurate estimates of the num- ber of clusters than the PAC method, which can sometimes overestimate the ... See full document
8
The role of the WNT/β catenin pathway in central nervous system primitive neuroectodermal tumours (CNS PNETs)
... number data from an overlapping cohort of tumours, we were able to identify specific changes significantly enriched for in WNT/b-catenin pathway active or inactive CNS ...the data from this ... See full document
14
VAN: an R package for identifying biologically perturbed networks via differential variability analysis
... the expression and network ...cancer Gene Census [27] database to determine whether one or more of the 81 hubs (associated with the dysregulated modules) have previously been causally implicated in ... See full document
10
Detecting microRNA activity from gene expression data
... specifically associated with the split we are interested in (9 PTC vs 9 normal tissue), we performed a supervised analysis of the data, combining CIA and ...orientation from the origin) and plotting ... See full document
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Programmed death ligand 1 expression in human intrahepatic cholangiocarcinoma and its association with prognosis and CD8<sup>+</sup> T-cell immune responses
... rehydrating and antigen retrieval, primary antibodies were applied to slides, incubated at 4°C overnight, followed by incubation with secondary antibody (Dako Denmark A/S, Glostrup, Denmark) at 37°C for 30 minutes. A ... See full document
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The significance of Cancer stem cell markers’ gene expression and Relevance for Survival Outcomes
... recent data suggest the presence of cancer stem cells as cells with self-renewal and tumorigenic ...cell markers have been suggested to have prognostic value and can be targeted during cancer treatment and ... See full document
9
Computational Techniques To Recover Missing Data From Gene Expression Data
... relative expression levels in two or more mRNA populations can be analyzed for tens of thousands of genes ...transcribed from mRNA purified from cellular contents are hybridized onto a cDNA ...the ... See full document
21
Novel Analysis of Immune Cells from Nasal Microbiopsy Demonstrates Reliable, Reproducible Data for Immune Populations, and Superior Cytokine Detection Compared to Nasal Wash
... The second nasal sampling technique that we assessed was the use of nasosorption devices to collect nasal lining fluid. Importantly, the nasal lining fluid contained cytokines in concen- trations that were increased ... See full document
12
Construction of a Single-Nucleotide Polymorphism Marker Based Quantitative Trait Loci Map and Validation of Resistance Loci to Bacterial Wilt (Ralstonia solanacearum) in Tomato
... isolates. These results corroborated findings of previous H7996 mapping studies [29, 36-37] except in this study the Bwr-12 region in trials PH-Tm151 and ID-PW were shifted toward the distal end of a 2.9 cM interval ... See full document
8
Original Article WNT3A gene expression is associated with isolated Hirschsprung disease polymorphism and disease status
... extracted from the aganglionic and normal ganglionic colon segment tissues with HSCR by using TRIzol reagent (Invitrogen) according to the manufacturer’s ...housekeeping gene β-actin (Takara, DR3783) was ... See full document
299
Original Article Using gene set enrichment analysis to identify new genes involved in sepsis-induced myopathy
... derived from gene expression measurements in hu- mans, there are several caveats that limit the interpretation of the ...PARK7 expression levels were unchanged while HIF1A, FAS and UPF1 ... See full document
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Classification of Cancer Gene Subtypes from Clustering of Gene Expression Data
... the gene subtypes co-clustering algorithm called Network assisted Co-clustering for the Identification of cancer Subtypes ...method from matrix factorization-based clustering family in this ...as ... See full document
8
Two-Stage Designs in Case–Control Association Analysis
... candidate markers from a very large number of markers to be followed up by more accurate and informative individual ...candidate markers for second-stage analysis, statistical power of this ... See full document
69
Two-dimensional enrichment analysis for mining high-level imaging genetic associations
... LM010098. Data collection and sharing for this project was funded by the Alzheimer’s Disease Neuroimaging Initiative (ADNI) (National Institutes of Health Grant U01 AG024904) and DOD ADNI (Department of ... See full document
5
Candidate gene based GWAS identifies reproducible DNA markers for metabolic pyrethroid resistance from standing genetic variation in East African Anopheles gambiae
... the gene (L43F) (see Materials and Methods for details of ...highly reproducible, with significant resistance association in five out of seven independent sample sets from both Uganda and Kenya ... See full document
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